Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796996.1_cds_XP_016452668.1_4636
CDS Infomation

[gene=LOC107777179] [db_xref=GeneID:107777179] [protein=BRCA1-associated protein-like isoform X3] [protein_id=XP_016452668.1] [location=complement(join(20380..20427,20512..20566,21358..21422,21564..21713,21878..21931,22085..22334,22490..22596,25316..25413,27049..27163,27272..27380,27477..27547))] [gbkey=CDS]
Sequence

ATGACATATGCAGACTTTTGTCAGTTTTGTGGTTCATTTGTTCAACATATGTTGGAAATG
CGAATTGTCAGGAATGATGGAATGGAAGATTGTTACAGTATATTGATCAGGTTTGATGAG
CAGAAAGCTGCAGATACTTTTTACAAGCATTTTAATGGTAGACGATTTTCATCTCTTGAG
GACGAGACCTGCAATGTGCTTTTTGCTGCTGATGTTCATTACACTGGTTCAATTGAACGC
ACCCAGTCCATACCTGCAAGCTCTACAGAGCAACCATTCTGTCCTGTTTGTCTTGAGAGA
CTGGACCAGGATACAAGTGGAATTCTCACAACCATTTGTAATCACTCCTTTCATTGTTCA
TGTATTTCTAAATGGACAGATTCTTCGTGCCCTGTATGTCGATACTGCCAGCAGCAGCCT
GGAAACTCAACGTGTTCTATCTGTCAATCACCAGAAAATCTATGGATGTGTGTTATTTGT
GGTTTTGTTGGCTGTGGAAGATACAAAGAAGCTCATGCTATAAGGCACTGGAAAGAGACA
CAACATTGCTATGCACTTGAACTGGAAACGCGTCGTGTCTGGGACTACGCAGGGGACAAC
TATGTTCACCGTTTGATTCAGTCTAAAACTGATGGCAAGTTGGTTGAGCTCAACCACCAT
TGTCATCATGATATTGATGGCTGCTGCAGCTGCGAATGTGCTACAGATCCTGGATTTAGT
GAGACTCTTGCAAACAGCAAAGTTGAAGCTATTGTGAACGAGTACAATGAGCTCCTGACT
TTGCAACTGGAGAACCAAAAAATGTACTTCGAGTCCTTACTGCAAGAGGTTGAAGAAGAA
ACTGATAGGGAAATTAAGGAAGCTGTTGAGAAATCACTTTGTCAGAATCCAAGGTTGATG
AAGTTAAAAGTGCGTTTGGACAAATGCATTGAAGAGAAGAAATTTCTTGATGATATCAAT
GACAATCTTACCAGAAACAAGGATATATGGGAAGCCAAGATATCGGAGATTGAAGAAAGG
GAGAAGAGGAAGTTGAAAATGAAGGATGAGAAGATACACGAATTGGAGGAACAGCTTGCA
ACTCTGATGGCATCCATCGAAACGGAGAATGCAGTTCAATAG

Peptide Sequence

PEP ID

XP_016452668.1
PEP Infomation

PREDICTED: BRCA1-associated protein-like isoform X3 [Nicotiana tabacum]
Sequence

MTYADFCQFCGSFVQHMLEMRIVRNDGMEDCYSILIRFDEQKAADTFYKHFNGRRFSSLE
DETCNVLFAADVHYTGSIERTQSIPASSTEQPFCPVCLERLDQDTSGILTTICNHSFHCS
CISKWTDSSCPVCRYCQQQPGNSTCSICQSPENLWMCVICGFVGCGRYKEAHAIRHWKET
QHCYALELETRRVWDYAGDNYVHRLIQSKTDGKLVELNHHCHHDIDGCCSCECATDPGFS
ETLANSKVEAIVNEYNELLTLQLENQKMYFESLLQEVEEETDREIKEAVEKSLCQNPRLM
KLKVRLDKCIEEKKFLDDINDNLTRNKDIWEAKISEIEEREKRKLKMKDEKIHELEEQLA
TLMASIETENAVQ

Transcript Sequence

Gene sequence data has not been registered.